Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
Mlab_0752Uncharacterized protein-like protein. (122 aa)    
Predicted Functional Partners:
Mlab_0751
PFAM: GTP-binding protein, HSR1-related; Miro domain protein.
     
 0.933
Mlab_0753
Zn-ribbon containing protein-like protein.
     
 0.902
Mlab_0993
PFAM: sugar isomerase (SIS).
       0.513
Mlab_0994
Aminotransferase; PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase, class I and II.
       0.512
Mlab_0750
PFAM: CBS domain containing protein.
       0.501
Mlab_0624
PFAM: GTP-binding protein, HSR1-related; TGS domain protein; GTPase of unknown function-like.
      
 0.452
Mlab_0754
PFAM: phosphoesterase, RecJ domain protein; TrkA-N domain protein; phosphoesterase, DHHA1.
       0.410
mptE
Protein of unknown function DUF115; Catalyzes the transfer of diphosphate from ATP to 6- hydroxymethyl-7,8-dihydropterin (6-HMD), leading to 6-hydroxymethyl- 7,8-dihydropterin diphosphate (6-HMDP); Belongs to the archaeal 6-HMPDK family.
       0.401
Mlab_0756
PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB.
       0.401
Your Current Organism:
Methanocorpusculum labreanum
NCBI taxonomy Id: 410358
Other names: M. labreanum Z, Methanocorpusculum labreanum Z, Methanocorpusculum labreanum str. Z, Methanocorpusculum labreanum strain Z
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