STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mlab_0958PFAM: NADH dehydrogenase (ubiquinone), 30 kDa subunit. (193 aa)    
Predicted Functional Partners:
Mlab_0959
Membrane bound hydrogenase subunit mbhL; PFAM: NADH-ubiquinone oxidoreductase, chain 49kDa.
 
 
 
 0.974
Mlab_0961
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein.
 
 
   0.971
Mlab_0949
Membrane bound hydrogenase subunit mbhB; PFAM: multiple resistance and pH regulation protein F.
 
 
   0.966
Mlab_0955
Membrane bound hydrogenase subunit mbhH; PFAM: NADH/Ubiquinone/plastoquinone (complex I).
 
 
   0.964
Mlab_0956
Membrane bound hydrogenase subunit mbhI.
   
 
 0.960
Mlab_0948
Membrane bound hydrogenase subunit mbhA; PFAM: cation antiporter.
 
 
   0.958
Mlab_0952
Membrane bound hydrogenase subunit mbhE.
 
 
   0.958
Mlab_0950
Membrane bound hydrogenase subunit mbhC; TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; PFAM: Na+/H+ antiporter subunit.
 
 
   0.957
Mlab_0957
Membrane bound hydrogenase subunit mbhJ; TIGRFAM: NADH-quinone oxidoreductase, B subunit; PFAM: NADH ubiquinone oxidoreductase, 20 kDa subunit; Belongs to the complex I 20 kDa subunit family.
   
 
 0.957
Mlab_0953
PFAM: Na+/H+ antiporter MnhB subunit-related protein.
 
 
   0.955
Your Current Organism:
Methanocorpusculum labreanum
NCBI taxonomy Id: 410358
Other names: M. labreanum Z, Methanocorpusculum labreanum Z, Methanocorpusculum labreanum str. Z, Methanocorpusculum labreanum strain Z
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