STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mlab_1047PFAM: glycerophosphoryl diester phosphodiesterase. (282 aa)    
Predicted Functional Partners:
Mlab_1284
TIGRFAM: MIP family channel protein; PFAM: major intrinsic protein.
  
 
 0.751
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
  
  
 0.573
Mlab_1117
TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; TC 3.A.1.7.1.
  
  
 0.517
Mlab_1046
PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase.
       0.516
Mlab_0932
Inosine-guanosine kinase / cytidine kinase; PFAM: PfkB domain protein.
 
  
 0.511
rpl4
LSU ribosomal protein L4P; Forms part of the polypeptide exit tunnel.
  
 
 0.471
Mlab_1118
TIGRFAM: phosphate binding protein; PFAM: extracellular solute-binding protein, family 1; TC 3.A.1.7.1.
  
  
 0.426
Mlab_1154
Zn-dependent hydrolase of the beta-lactamase fold-like protein; Belongs to the UPF0173 family.
 
   
 0.425
Mlab_1643
Hypothetical protein.
     
 0.416
Mlab_1115
Phosphate uptake regulator, PhoU; Plays a role in the regulation of phosphate uptake.
  
  
 0.412
Your Current Organism:
Methanocorpusculum labreanum
NCBI taxonomy Id: 410358
Other names: M. labreanum Z, Methanocorpusculum labreanum Z, Methanocorpusculum labreanum str. Z, Methanocorpusculum labreanum strain Z
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.