STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mlab_1218PFAM: H+-transporting two-sector ATPase, C subunit. (83 aa)    
Predicted Functional Partners:
Mlab_1217
H(+)-transporting two-sector ATPase; PFAM: V-type ATPase, 116 kDa subunit; Belongs to the V-ATPase 116 kDa subunit family.
 
 0.999
atpE
H+-transporting two-sector ATPase, E subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.
 
 0.999
atpC
H(+)-transporting two-sector ATPase; Produces ATP from ADP in the presence of a proton gradient across the membrane.
 
 0.999
atpF
Vacuolar H+-transporting two-sector ATPase, F subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.
 
 0.999
atpA
H+-transporting two-sector ATPase, alpha/beta subunit, central region; Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.
 
 0.999
atpB
H+-transporting two-sector ATPase, alpha/beta subunit, central region; Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal beta chain is a regulatory subunit.
 
 0.999
atpD
V-type ATPase, D subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.
 
 0.999
Mlab_1216
Hypothetical protein.
  
 0.996
rps14
SSU ribosomal protein S14P; Binds 16S rRNA, required for the assembly of 30S particles.
  
  
 0.953
rpl10e
PFAM: Ribosomal protein L10E; Belongs to the universal ribosomal protein uL16 family.
  
  
 0.953
Your Current Organism:
Methanocorpusculum labreanum
NCBI taxonomy Id: 410358
Other names: M. labreanum Z, Methanocorpusculum labreanum Z, Methanocorpusculum labreanum str. Z, Methanocorpusculum labreanum strain Z
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