STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mlab_1233Heavy metal translocating P-type ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper ion binding protein; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein. (810 aa)    
Predicted Functional Partners:
Mlab_1234
Translation factor SUA5; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC, N-terminal domain.
       0.779
Mlab_1235
PFAM: amino acid-binding ACT domain protein.
       0.773
Mlab_0526
TIGRFAM: porphobilinogen deaminase; uroporphyrin-III C-methyltransferase; PFAM: Porphobilinogen deaminase; Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase.
  
  
 0.737
Mlab_1231
PFAM: AMP-dependent synthetase and ligase.
  
  
 0.589
Mlab_1232
PFAM: AMP-dependent synthetase and ligase.
  
  
 0.589
Mlab_0303
Transcriptional regulator, ArsR family; PFAM: regulatory protein, ArsR.
  
  
 0.586
Mlab_0002
Putative transcriptional regulator, AsnC family; PFAM: regulatory protein, AsnC/Lrp family.
     
 0.541
Mlab_0324
PFAM: regulatory protein, MarR; transcriptional regulator TrmB.
     
 0.541
Mlab_1025
Tungstate/molybdate binding protein.
     
 0.532
Mlab_1236
PFAM: regulatory protein, ArsR; transcriptional regulator TrmB.
       0.511
Your Current Organism:
Methanocorpusculum labreanum
NCBI taxonomy Id: 410358
Other names: M. labreanum Z, Methanocorpusculum labreanum Z, Methanocorpusculum labreanum str. Z, Methanocorpusculum labreanum strain Z
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