Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Pcal_0762 | Pcal_0763 | Pcal_0762 | Pcal_0763 | Transcriptional regulator, Fis family; Involved in DNA repair and in homologous recombination. Binds and assemble on single-stranded DNA to form a nucleoprotein filament. Hydrolyzes ATP in a ssDNA-dependent manner and promotes DNA strand exchange between homologous DNA molecules. | SMART: AAA ATPase. | 0.467 |
Pcal_0762 | Pcal_0764 | Pcal_0762 | Pcal_0764 | Transcriptional regulator, Fis family; Involved in DNA repair and in homologous recombination. Binds and assemble on single-stranded DNA to form a nucleoprotein filament. Hydrolyzes ATP in a ssDNA-dependent manner and promotes DNA strand exchange between homologous DNA molecules. | PFAM: zinc finger, SWIM domain protein; KEGG: pai:PAE1404 hypothetical protein. | 0.467 |
Pcal_0762 | Pcal_0767 | Pcal_0762 | Pcal_0767 | Transcriptional regulator, Fis family; Involved in DNA repair and in homologous recombination. Binds and assemble on single-stranded DNA to form a nucleoprotein filament. Hydrolyzes ATP in a ssDNA-dependent manner and promotes DNA strand exchange between homologous DNA molecules. | Chromosome segregation ATPase-like protein; KEGG: tcr:509269.4 Tb-291 membrane-associated protein-like Pfam: Plasmodium_HRP Vicilin_N PROSITE: ALA_RICH ARG_RICH GLU_RICH. | 0.522 |
Pcal_0763 | Pcal_0762 | Pcal_0763 | Pcal_0762 | SMART: AAA ATPase. | Transcriptional regulator, Fis family; Involved in DNA repair and in homologous recombination. Binds and assemble on single-stranded DNA to form a nucleoprotein filament. Hydrolyzes ATP in a ssDNA-dependent manner and promotes DNA strand exchange between homologous DNA molecules. | 0.467 |
Pcal_0763 | Pcal_0764 | Pcal_0763 | Pcal_0764 | SMART: AAA ATPase. | PFAM: zinc finger, SWIM domain protein; KEGG: pai:PAE1404 hypothetical protein. | 0.773 |
Pcal_0763 | Pcal_0765 | Pcal_0763 | Pcal_0765 | SMART: AAA ATPase. | Hypothetical protein. | 0.433 |
Pcal_0763 | Pcal_0766 | Pcal_0763 | Pcal_0766 | SMART: AAA ATPase. | Hypothetical protein. | 0.433 |
Pcal_0763 | Pcal_0767 | Pcal_0763 | Pcal_0767 | SMART: AAA ATPase. | Chromosome segregation ATPase-like protein; KEGG: tcr:509269.4 Tb-291 membrane-associated protein-like Pfam: Plasmodium_HRP Vicilin_N PROSITE: ALA_RICH ARG_RICH GLU_RICH. | 0.433 |
Pcal_0764 | Pcal_0762 | Pcal_0764 | Pcal_0762 | PFAM: zinc finger, SWIM domain protein; KEGG: pai:PAE1404 hypothetical protein. | Transcriptional regulator, Fis family; Involved in DNA repair and in homologous recombination. Binds and assemble on single-stranded DNA to form a nucleoprotein filament. Hydrolyzes ATP in a ssDNA-dependent manner and promotes DNA strand exchange between homologous DNA molecules. | 0.467 |
Pcal_0764 | Pcal_0763 | Pcal_0764 | Pcal_0763 | PFAM: zinc finger, SWIM domain protein; KEGG: pai:PAE1404 hypothetical protein. | SMART: AAA ATPase. | 0.773 |
Pcal_0764 | Pcal_0765 | Pcal_0764 | Pcal_0765 | PFAM: zinc finger, SWIM domain protein; KEGG: pai:PAE1404 hypothetical protein. | Hypothetical protein. | 0.433 |
Pcal_0764 | Pcal_0766 | Pcal_0764 | Pcal_0766 | PFAM: zinc finger, SWIM domain protein; KEGG: pai:PAE1404 hypothetical protein. | Hypothetical protein. | 0.433 |
Pcal_0764 | Pcal_0767 | Pcal_0764 | Pcal_0767 | PFAM: zinc finger, SWIM domain protein; KEGG: pai:PAE1404 hypothetical protein. | Chromosome segregation ATPase-like protein; KEGG: tcr:509269.4 Tb-291 membrane-associated protein-like Pfam: Plasmodium_HRP Vicilin_N PROSITE: ALA_RICH ARG_RICH GLU_RICH. | 0.433 |
Pcal_0765 | Pcal_0763 | Pcal_0765 | Pcal_0763 | Hypothetical protein. | SMART: AAA ATPase. | 0.433 |
Pcal_0765 | Pcal_0764 | Pcal_0765 | Pcal_0764 | Hypothetical protein. | PFAM: zinc finger, SWIM domain protein; KEGG: pai:PAE1404 hypothetical protein. | 0.433 |
Pcal_0765 | Pcal_0766 | Pcal_0765 | Pcal_0766 | Hypothetical protein. | Hypothetical protein. | 0.773 |
Pcal_0765 | Pcal_0767 | Pcal_0765 | Pcal_0767 | Hypothetical protein. | Chromosome segregation ATPase-like protein; KEGG: tcr:509269.4 Tb-291 membrane-associated protein-like Pfam: Plasmodium_HRP Vicilin_N PROSITE: ALA_RICH ARG_RICH GLU_RICH. | 0.773 |
Pcal_0766 | Pcal_0763 | Pcal_0766 | Pcal_0763 | Hypothetical protein. | SMART: AAA ATPase. | 0.433 |
Pcal_0766 | Pcal_0764 | Pcal_0766 | Pcal_0764 | Hypothetical protein. | PFAM: zinc finger, SWIM domain protein; KEGG: pai:PAE1404 hypothetical protein. | 0.433 |
Pcal_0766 | Pcal_0765 | Pcal_0766 | Pcal_0765 | Hypothetical protein. | Hypothetical protein. | 0.773 |
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