STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDV56_102385Fe2OG dioxygenase domain-containing protein. (360 aa)    
Predicted Functional Partners:
CDV56_109132
Uncharacterized protein.
   
 
 0.658
CDV56_104337
ENDO3c domain-containing protein.
     
 0.586
CDV56_100659
Uncharacterized protein.
      
 0.524
CDV56_105595
HTH araC/xylS-type domain-containing protein.
      
 0.517
CDV56_108136
ENDO3c domain-containing protein.
     
 0.509
CDV56_105074
DNA_binding_1 domain-containing protein.
  
  
 0.499
CDV56_101576
Uncharacterized protein.
  
  
 0.499
CDV56_103954
Fe2OG dioxygenase domain-containing protein.
   
  
 0.482
CDV56_106794
Uncharacterized protein; Belongs to the MT-A70-like family.
   
  
 0.482
TRM6
tRNA (Adenine(58)-N(1))-methyltransferase non-catalytic subunit trm6.
   
  
 0.479
Your Current Organism:
Aspergillus thermomutatus
NCBI taxonomy Id: 41047
Other names: A. thermomutatus, Aspergillus fischeri var. thermomutatus, CBS 208.92, NRRL 20748, Neosartorya pseudofischeri
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