STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDV56_102871Uncharacterized protein. (222 aa)    
Predicted Functional Partners:
CDV56_101384
Uncharacterized protein; Belongs to the complex I LYR family.
    
 0.760
CDV56_100978
Uncharacterized protein.
   
   0.748
CDV56_106195
BZIP domain-containing protein.
    
  0.730
CRP46
60S ribosomal protein L16; Belongs to the universal ribosomal protein uL13 family.
   
   0.705
CDV56_106224
Uncharacterized protein.
    
 0.697
RPL2
60S ribosomal protein L2.
   
 
 0.681
CDV56_104059
Uncharacterized protein.
    
  0.674
CDV56_105466
Uncharacterized protein.
   
 0.674
RPN11
Multicatalytic endopeptidase.
    
  0.674
CDV56_100412
Uncharacterized protein.
   
   0.671
Your Current Organism:
Aspergillus thermomutatus
NCBI taxonomy Id: 41047
Other names: A. thermomutatus, Aspergillus fischeri var. thermomutatus, CBS 208.92, NRRL 20748, Neosartorya pseudofischeri
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.