CDV56_107246 protein (Aspergillus thermomutatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

CDV56_107246

Uncharacterized protein. (499 aa)

Predicted Functional Partners:

CDV56_105583

0.755

CDV56_102919

0.682

CDV56_103215

0.611

CDV56_101409

0.585

CDV56_105138

0.583

CDV56_105977

0.572

CDV56_102961

0.568

CDV56_103254

0.555

CDV56_101921

0.553

CDV56_108177

0.551

Your Current Organism:

Aspergillus thermomutatus

NCBI taxonomy Id: 41047
Other names: A. thermomutatus, Aspergillus fischeri var. thermomutatus, CBS 208.92, NRRL 20748, Neosartorya pseudofischeri

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CDV56_101409	CDV56_101921	A0A397G3D1	A0A397G321	Uncharacterized protein.	Uncharacterized protein.	0.994
CDV56_101409	CDV56_102961	A0A397G3D1	A0A397GAU5	Uncharacterized protein.	Uncharacterized protein.	0.990
CDV56_101409	CDV56_103215	A0A397G3D1	A0A397G5C4	Uncharacterized protein.	Uncharacterized protein.	0.994
CDV56_101409	CDV56_103254	A0A397G3D1	A0A397HZ44	Uncharacterized protein.	Uncharacterized protein.	0.994
CDV56_101409	CDV56_105138	A0A397G3D1	A0A397H731	Uncharacterized protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.993
CDV56_101409	CDV56_105977	A0A397G3D1	A0A397H6T4	Uncharacterized protein.	TFIID_20kDa domain-containing protein.	0.984
CDV56_101409	CDV56_107246	A0A397G3D1	A0A397GUI8	Uncharacterized protein.	Uncharacterized protein.	0.585
CDV56_101409	CDV56_108177	A0A397G3D1	A0A397H161	Uncharacterized protein.	TAF domain-containing protein.	0.995
CDV56_101921	CDV56_101409	A0A397G321	A0A397G3D1	Uncharacterized protein.	Uncharacterized protein.	0.994
CDV56_101921	CDV56_102961	A0A397G321	A0A397GAU5	Uncharacterized protein.	Uncharacterized protein.	0.998
CDV56_101921	CDV56_103215	A0A397G321	A0A397G5C4	Uncharacterized protein.	Uncharacterized protein.	0.994
CDV56_101921	CDV56_103254	A0A397G321	A0A397HZ44	Uncharacterized protein.	Uncharacterized protein.	0.998
CDV56_101921	CDV56_105138	A0A397G321	A0A397H731	Uncharacterized protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.998
CDV56_101921	CDV56_105977	A0A397G321	A0A397H6T4	Uncharacterized protein.	TFIID_20kDa domain-containing protein.	0.998
CDV56_101921	CDV56_107246	A0A397G321	A0A397GUI8	Uncharacterized protein.	Uncharacterized protein.	0.553
CDV56_101921	CDV56_108177	A0A397G321	A0A397H161	Uncharacterized protein.	TAF domain-containing protein.	0.998
CDV56_102919	CDV56_107246	A0A397GD46	A0A397GUI8	Uncharacterized protein.	Uncharacterized protein.	0.682
CDV56_102961	CDV56_101409	A0A397GAU5	A0A397G3D1	Uncharacterized protein.	Uncharacterized protein.	0.990
CDV56_102961	CDV56_101921	A0A397GAU5	A0A397G321	Uncharacterized protein.	Uncharacterized protein.	0.998
CDV56_102961	CDV56_103215	A0A397GAU5	A0A397G5C4	Uncharacterized protein.	Uncharacterized protein.	0.994