STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDV56_105875Uncharacterized protein. (581 aa)    
Predicted Functional Partners:
CDV56_100648
HECT domain-containing protein.
   
  
 0.935
CDV56_106195
BZIP domain-containing protein.
    
   0.875
RNR2
Ribonucleotide-diphosphate reductase (RNR), small subunit.
     
 0.653
CDV56_102695
BRCT domain-containing protein.
  
 
 0.618
CDV56_105924
MIF4G domain-containing protein.
   
   0.591
CDV56_102198
Uncharacterized protein.
   
   0.591
CDV56_109504
Uncharacterized protein.
   
   0.591
CDV56_106281
Uncharacterized protein.
   
   0.591
SET2
Histone methyltransferase set2; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. SET2 subfamily.
   
  
 0.585
CDV56_105621
WD_REPEATS_REGION domain-containing protein.
    
 
 0.572
Your Current Organism:
Aspergillus thermomutatus
NCBI taxonomy Id: 41047
Other names: A. thermomutatus, Aspergillus fischeri var. thermomutatus, CBS 208.92, NRRL 20748, Neosartorya pseudofischeri
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