STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDV56_108878Alpha-L-AF_C domain-containing protein. (1526 aa)    
Predicted Functional Partners:
KLP1
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 0.769
CDV56_100004
CDC73_C domain-containing protein.
    
 0.756
CDV56_106177
Uncharacterized protein.
    
 0.755
CDV56_105420
DOC domain-containing protein.
    
 0.753
CDV56_104001
Uncharacterized protein.
    
 0.751
CDV56_108963
Uncharacterized protein.
    
 0.751
CDV56_100831
Uncharacterized protein.
    
 0.750
CDV56_105699
Uncharacterized protein.
    
 0.740
CDV56_101361
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.739
RVB1
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
 0.659
Your Current Organism:
Aspergillus thermomutatus
NCBI taxonomy Id: 41047
Other names: A. thermomutatus, Aspergillus fischeri var. thermomutatus, CBS 208.92, NRRL 20748, Neosartorya pseudofischeri
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