A0A2I2EYW4 protein (Aspergillus candidus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A2I2EYW4

E3 ubiquitin protein ligase. (654 aa)

Predicted Functional Partners:

A0A2I2F477

0.995

A0A2I2FFL8

0.912

A0A2I2F0R1

0.902

A0A2I2FJF1

0.897

A0A2I2F1V1

0.863

A0A2I2FH75

0.858

A0A2I2F276

0.847

A0A2I2F242

0.799

A0A2I2FDW3

0.743

A0A2I2FFQ7

0.743

Your Current Organism:

Aspergillus candidus

NCBI taxonomy Id: 41067
Other names: A. candidus, CBS 566.65

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A2I2EYW4	A0A2I2F0R1	E3 ubiquitin protein ligase.	CDC73-domain-containing protein.	0.902
A0A2I2EYW4	A0A2I2F1V1	E3 ubiquitin protein ligase.	Leo1-like protein-domain-containing protein.	0.863
A0A2I2EYW4	A0A2I2F242	E3 ubiquitin protein ligase.	Uncharacterized protein; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. SET2 subfamily.	0.799
A0A2I2EYW4	A0A2I2F276	E3 ubiquitin protein ligase.	Protein prenylyltransferase.	0.847
A0A2I2EYW4	A0A2I2F477	E3 ubiquitin protein ligase.	Putative ubiquitin conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.	0.995
A0A2I2EYW4	A0A2I2FDW3	E3 ubiquitin protein ligase.	Ubiquitin conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.	0.743
A0A2I2EYW4	A0A2I2FFL8	E3 ubiquitin protein ligase.	Histone H2B; Belongs to the histone H2B family.	0.912
A0A2I2EYW4	A0A2I2FFQ7	E3 ubiquitin protein ligase.	Uncharacterized protein.	0.743
A0A2I2EYW4	A0A2I2FH75	E3 ubiquitin protein ligase.	Uncharacterized protein.	0.858
A0A2I2EYW4	A0A2I2FJF1	E3 ubiquitin protein ligase.	Uncharacterized protein.	0.897
A0A2I2F0R1	A0A2I2EYW4	CDC73-domain-containing protein.	E3 ubiquitin protein ligase.	0.902
A0A2I2F0R1	A0A2I2F1V1	CDC73-domain-containing protein.	Leo1-like protein-domain-containing protein.	0.999
A0A2I2F0R1	A0A2I2F242	CDC73-domain-containing protein.	Uncharacterized protein; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. SET2 subfamily.	0.543
A0A2I2F0R1	A0A2I2F276	CDC73-domain-containing protein.	Protein prenylyltransferase.	0.999
A0A2I2F0R1	A0A2I2F477	CDC73-domain-containing protein.	Putative ubiquitin conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.	0.799
A0A2I2F0R1	A0A2I2FDW3	CDC73-domain-containing protein.	Ubiquitin conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.	0.437
A0A2I2F0R1	A0A2I2FFL8	CDC73-domain-containing protein.	Histone H2B; Belongs to the histone H2B family.	0.965
A0A2I2F0R1	A0A2I2FFQ7	CDC73-domain-containing protein.	Uncharacterized protein.	0.434
A0A2I2F0R1	A0A2I2FH75	CDC73-domain-containing protein.	Uncharacterized protein.	0.659
A0A2I2F0R1	A0A2I2FJF1	CDC73-domain-containing protein.	Uncharacterized protein.	0.999