STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCB48334.1Predicted arabinose efflux permease, MFS family. (419 aa)    
Predicted Functional Partners:
SCB39970.1
Drug resistance transporter, EmrB/QacA subfamily; Belongs to the major facilitator superfamily.
  
     0.602
SCB27027.1
Major Facilitator Superfamily protein.
  
     0.589
SCB09690.1
Assimilatory nitrate reductase catalytic subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
    
  0.542
SCB26438.1
Anthranilate synthase, component I /anthranilate synthase, component II.
    
  0.537
SCB11206.1
Acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase.
  
 
  0.526
SCB44727.1
Major Facilitator Superfamily protein.
  
     0.471
SCB48339.1
Cystine transport system ATP-binding protein.
       0.416
SCB48344.1
Cystine transport system permease protein.
       0.416
Your Current Organism:
Rhizobium multihospitium
NCBI taxonomy Id: 410764
Other names: CCBAU 83401, HAMBI 2975, LMG 23946, LMG:23946, R. multihospitium, Rhizobium multihospitium Han et al. 2008, Rhizobium sp. CCBAU 83277, Rhizobium sp. CCBAU 83319, Rhizobium sp. CCBAU 83325, Rhizobium sp. CCBAU 83333, Rhizobium sp. CCBAU 83345, Rhizobium sp. CCBAU 83364, Rhizobium sp. CCBAU 83375, Rhizobium sp. CCBAU 83401, Rhizobium sp. CCBAU 83435, Rhizobium sp. CCBAU 83503, Rhizobium sp. CCBAU 83523
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