STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCB07478.1Methyltransferase, FkbM family. (287 aa)    
Predicted Functional Partners:
SCB07473.1
Glycosyltransferase involved in cell wall bisynthesis.
 
     0.798
gcvP
Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
    
  0.683
SCB11889.1
Methyltransferase, FkbM family.
  
     0.667
SCB07467.1
Hypothetical protein.
       0.608
SCB07485.1
Polysaccharide export outer membrane protein.
 
     0.565
SCB27634.1
Dimethylglycine dehydrogenase; Belongs to the GcvT family.
    
  0.540
SCB27918.1
4-methylaminobutanoate oxidase (formaldehyde-forming); Belongs to the GcvT family.
    
  0.540
SCB30641.1
Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family.
    
  0.540
SCB23055.1
Acyl transferase domain-containing protein.
 
  
 0.535
SCB33208.1
Enterobactin synthetase component F; Belongs to the ATP-dependent AMP-binding enzyme family.
     
 0.483
Your Current Organism:
Rhizobium multihospitium
NCBI taxonomy Id: 410764
Other names: CCBAU 83401, HAMBI 2975, LMG 23946, LMG:23946, R. multihospitium, Rhizobium multihospitium Han et al. 2008, Rhizobium sp. CCBAU 83277, Rhizobium sp. CCBAU 83319, Rhizobium sp. CCBAU 83325, Rhizobium sp. CCBAU 83333, Rhizobium sp. CCBAU 83345, Rhizobium sp. CCBAU 83364, Rhizobium sp. CCBAU 83375, Rhizobium sp. CCBAU 83401, Rhizobium sp. CCBAU 83435, Rhizobium sp. CCBAU 83503, Rhizobium sp. CCBAU 83523
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