Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCB08978.1 | SCB23708.1 | GA0061103_1304 | GA0061103_3366 | Oxidoreductase alpha (molybdopterin) subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Translation elongation factor TU. | 0.808 |
SCB08978.1 | SCB26149.1 | GA0061103_1304 | GA0061103_3612 | Oxidoreductase alpha (molybdopterin) subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.953 |
SCB08978.1 | SCB26518.1 | GA0061103_1304 | GA0061103_3664 | Oxidoreductase alpha (molybdopterin) subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Cytochrome c. | 0.946 |
SCB08978.1 | SCB29279.1 | GA0061103_1304 | GA0061103_4097 | Oxidoreductase alpha (molybdopterin) subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Glutamate synthase (NADH) large subunit. | 0.893 |
SCB08978.1 | SCB42256.1 | GA0061103_1304 | GA0061103_6062 | Oxidoreductase alpha (molybdopterin) subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Translation elongation factor TU. | 0.808 |
SCB08978.1 | SCB44274.1 | GA0061103_1304 | GA0061103_6442 | Oxidoreductase alpha (molybdopterin) subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Ni,Fe-hydrogenase III large subunit. | 0.828 |
SCB08978.1 | SCB50636.1 | GA0061103_1304 | GA0061103_0876 | Oxidoreductase alpha (molybdopterin) subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Cytochrome c. | 0.946 |
SCB08978.1 | SCB51047.1 | GA0061103_1304 | GA0061103_0996 | Oxidoreductase alpha (molybdopterin) subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Translation elongation factor TU. | 0.808 |
SCB08978.1 | SCB51103.1 | GA0061103_1304 | GA0061103_1015 | Oxidoreductase alpha (molybdopterin) subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Translation elongation factor TU; Partial gene; manually curated. | 0.808 |
SCB08978.1 | fdhD | GA0061103_1304 | GA0061103_6888 | Oxidoreductase alpha (molybdopterin) subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | FdhD protein; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family. | 0.899 |
SCB23708.1 | SCB08978.1 | GA0061103_3366 | GA0061103_1304 | Translation elongation factor TU. | Oxidoreductase alpha (molybdopterin) subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.808 |
SCB23708.1 | SCB26518.1 | GA0061103_3366 | GA0061103_3664 | Translation elongation factor TU. | Cytochrome c. | 0.895 |
SCB23708.1 | SCB42256.1 | GA0061103_3366 | GA0061103_6062 | Translation elongation factor TU. | Translation elongation factor TU. | 0.976 |
SCB23708.1 | SCB50636.1 | GA0061103_3366 | GA0061103_0876 | Translation elongation factor TU. | Cytochrome c. | 0.895 |
SCB23708.1 | SCB51103.1 | GA0061103_3366 | GA0061103_1015 | Translation elongation factor TU. | Translation elongation factor TU; Partial gene; manually curated. | 0.976 |
SCB26149.1 | SCB08978.1 | GA0061103_3612 | GA0061103_1304 | Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | Oxidoreductase alpha (molybdopterin) subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.953 |
SCB26149.1 | SCB26518.1 | GA0061103_3612 | GA0061103_3664 | Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | Cytochrome c. | 0.998 |
SCB26149.1 | SCB50636.1 | GA0061103_3612 | GA0061103_0876 | Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | Cytochrome c. | 0.998 |
SCB26518.1 | SCB08978.1 | GA0061103_3664 | GA0061103_1304 | Cytochrome c. | Oxidoreductase alpha (molybdopterin) subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.946 |
SCB26518.1 | SCB23708.1 | GA0061103_3664 | GA0061103_3366 | Cytochrome c. | Translation elongation factor TU. | 0.895 |
page 1 of 3