STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCB10741.12-methylcitrate dehydratase PrpD. (454 aa)    
Predicted Functional Partners:
SCB40660.1
Citrate synthase; Belongs to the citrate synthase family.
  
 
 0.900
SCB40667.1
Citrate synthase.
  
 
 0.900
SCB41403.1
Citrate synthase; Belongs to the citrate synthase family.
  
 
 0.900
SCB49476.1
Phosphoenolpyruvate phosphomutase.
  
 
 0.879
SCB50442.1
2-Methylisocitrate lyase, PEP mutase family.
  
 
 0.879
SCB39567.1
2-Methylisocitrate lyase, PEP mutase family.
  
 
 0.879
SCB39165.1
Catechol 2,3-dioxygenase.
 
    0.846
SCB28237.1
3-hydroxyacyl-CoA dehydrogenase.
 
 
  0.776
SCB13468.1
3-hydroxyacyl-CoA dehydrogenase.
 
 
  0.767
SCB43576.1
Isocitrate dehydrogenase (NADP); Belongs to the isocitrate and isopropylmalate dehydrogenases family.
  
 
 0.741
Your Current Organism:
Rhizobium multihospitium
NCBI taxonomy Id: 410764
Other names: CCBAU 83401, HAMBI 2975, LMG 23946, LMG:23946, R. multihospitium, Rhizobium multihospitium Han et al. 2008, Rhizobium sp. CCBAU 83277, Rhizobium sp. CCBAU 83319, Rhizobium sp. CCBAU 83325, Rhizobium sp. CCBAU 83333, Rhizobium sp. CCBAU 83345, Rhizobium sp. CCBAU 83364, Rhizobium sp. CCBAU 83375, Rhizobium sp. CCBAU 83401, Rhizobium sp. CCBAU 83435, Rhizobium sp. CCBAU 83503, Rhizobium sp. CCBAU 83523
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