Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCB09550.1 | SCB15022.1 | GA0061103_1379 | GA0061103_2231 | Beta-glucanase, GH16 family. | DNA-binding transcriptional regulator, MarR family. | 0.458 |
SCB11186.1 | SCB15022.1 | GA0061103_1628 | GA0061103_2231 | Protein of unknown function. | DNA-binding transcriptional regulator, MarR family. | 0.456 |
SCB15016.1 | SCB15022.1 | GA0061103_2230 | GA0061103_2231 | 2-polyprenyl-6-methoxyphenol hydroxylase. | DNA-binding transcriptional regulator, MarR family. | 0.696 |
SCB15016.1 | SCB38221.1 | GA0061103_2230 | GA0061103_5261 | 2-polyprenyl-6-methoxyphenol hydroxylase. | 2-polyprenyl-6-methoxyphenol hydroxylase. | 0.411 |
SCB15022.1 | SCB09550.1 | GA0061103_2231 | GA0061103_1379 | DNA-binding transcriptional regulator, MarR family. | Beta-glucanase, GH16 family. | 0.458 |
SCB15022.1 | SCB11186.1 | GA0061103_2231 | GA0061103_1628 | DNA-binding transcriptional regulator, MarR family. | Protein of unknown function. | 0.456 |
SCB15022.1 | SCB15016.1 | GA0061103_2231 | GA0061103_2230 | DNA-binding transcriptional regulator, MarR family. | 2-polyprenyl-6-methoxyphenol hydroxylase. | 0.696 |
SCB15022.1 | SCB15028.1 | GA0061103_2231 | GA0061103_2232 | DNA-binding transcriptional regulator, MarR family. | Serine protease, S1-C subfamily, contains C-terminal PDZ domain. | 0.467 |
SCB15022.1 | SCB23561.1 | GA0061103_2231 | GA0061103_3343 | DNA-binding transcriptional regulator, MarR family. | N-acetylglutamate synthase, GNAT family. | 0.428 |
SCB15022.1 | SCB38221.1 | GA0061103_2231 | GA0061103_5261 | DNA-binding transcriptional regulator, MarR family. | 2-polyprenyl-6-methoxyphenol hydroxylase. | 0.405 |
SCB15028.1 | SCB15022.1 | GA0061103_2232 | GA0061103_2231 | Serine protease, S1-C subfamily, contains C-terminal PDZ domain. | DNA-binding transcriptional regulator, MarR family. | 0.467 |
SCB23561.1 | SCB15022.1 | GA0061103_3343 | GA0061103_2231 | N-acetylglutamate synthase, GNAT family. | DNA-binding transcriptional regulator, MarR family. | 0.428 |
SCB38221.1 | SCB15016.1 | GA0061103_5261 | GA0061103_2230 | 2-polyprenyl-6-methoxyphenol hydroxylase. | 2-polyprenyl-6-methoxyphenol hydroxylase. | 0.411 |
SCB38221.1 | SCB15022.1 | GA0061103_5261 | GA0061103_2231 | 2-polyprenyl-6-methoxyphenol hydroxylase. | DNA-binding transcriptional regulator, MarR family. | 0.405 |