STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCB19443.1Diguanylate cyclase (GGDEF) domain-containing protein. (451 aa)    
Predicted Functional Partners:
SCB20282.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 
0.883
SCB26825.1
Signal transduction histidine kinase.
 
 0.820
SCB20679.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
0.796
SCB12119.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
0.783
SCB27954.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
 
 
0.765
SCB19436.1
PAS domain S-box-containing protein.
 
  
  0.741
SCB08288.1
Diguanylate cyclase (GGDEF) domain-containing protein.
  
 0.736
SCB43543.1
Two-component system, cell cycle sensor histidine kinase and response regulator CckA.
   
 0.732
SCB11180.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
0.722
SCB10458.1
Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor.
   
 0.675
Your Current Organism:
Rhizobium multihospitium
NCBI taxonomy Id: 410764
Other names: CCBAU 83401, HAMBI 2975, LMG 23946, LMG:23946, R. multihospitium, Rhizobium multihospitium Han et al. 2008, Rhizobium sp. CCBAU 83277, Rhizobium sp. CCBAU 83319, Rhizobium sp. CCBAU 83325, Rhizobium sp. CCBAU 83333, Rhizobium sp. CCBAU 83345, Rhizobium sp. CCBAU 83364, Rhizobium sp. CCBAU 83375, Rhizobium sp. CCBAU 83401, Rhizobium sp. CCBAU 83435, Rhizobium sp. CCBAU 83503, Rhizobium sp. CCBAU 83523
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