STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCB20333.1Biotin transport system substrate-specific component. (196 aa)    
Predicted Functional Partners:
SCB19998.1
Biotin transport system ATP-binding protein.
   
 0.982
SCB19993.1
Biotin transport system permease protein.
  
 0.967
SCB35179.1
Energy-coupling factor transport system permease protein.
  
 0.961
SCB20338.1
Hypothetical protein.
 
  0.954
SCB39817.1
Energy-coupling factor transport system permease protein.
 
 0.950
SCB19987.1
Biotin transport system substrate-specific component.
  
  
 
0.702
SCB40351.1
Biotin carboxyl carrier protein /biotin carboxylase.
 
  
  0.683
SCB13246.1
acetyl-CoA carboxylase, biotin carboxylase subunit.
 
  
  0.682
SCB20787.1
3-methylcrotonyl-CoA carboxylase alpha subunit.
 
  
  0.677
SCB34927.1
acetyl-CoA carboxylase, biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
 
  
  0.654
Your Current Organism:
Rhizobium multihospitium
NCBI taxonomy Id: 410764
Other names: CCBAU 83401, HAMBI 2975, LMG 23946, LMG:23946, R. multihospitium, Rhizobium multihospitium Han et al. 2008, Rhizobium sp. CCBAU 83277, Rhizobium sp. CCBAU 83319, Rhizobium sp. CCBAU 83325, Rhizobium sp. CCBAU 83333, Rhizobium sp. CCBAU 83345, Rhizobium sp. CCBAU 83364, Rhizobium sp. CCBAU 83375, Rhizobium sp. CCBAU 83401, Rhizobium sp. CCBAU 83435, Rhizobium sp. CCBAU 83503, Rhizobium sp. CCBAU 83523
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