STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCB25156.1Predicted dehydrogenase. (354 aa)    
Predicted Functional Partners:
SCB25170.1
Raffinose/stachyose/melibiose transport system permease protein.
 
     0.934
SCB25163.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
     0.924
SCB25175.1
Raffinose/stachyose/melibiose transport system substrate-binding protein.
 
     0.842
SCB25149.1
Multiple sugar transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
       0.757
SCB36414.1
dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.604
SCB21513.1
5-deoxyglucuronate isomerase.
 
  
 0.598
SCB13416.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
  
  
  0.596
SCB15358.1
Sugar phosphate isomerase/epimerase.
  
 
  0.592
SCB21529.1
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing); Belongs to the TPP enzyme family.
 
  
 0.589
SCB35658.1
Sugar phosphate isomerase/epimerase.
  
 
  0.531
Your Current Organism:
Rhizobium multihospitium
NCBI taxonomy Id: 410764
Other names: CCBAU 83401, HAMBI 2975, LMG 23946, LMG:23946, R. multihospitium, Rhizobium multihospitium Han et al. 2008, Rhizobium sp. CCBAU 83277, Rhizobium sp. CCBAU 83319, Rhizobium sp. CCBAU 83325, Rhizobium sp. CCBAU 83333, Rhizobium sp. CCBAU 83345, Rhizobium sp. CCBAU 83364, Rhizobium sp. CCBAU 83375, Rhizobium sp. CCBAU 83401, Rhizobium sp. CCBAU 83435, Rhizobium sp. CCBAU 83503, Rhizobium sp. CCBAU 83523
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