STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCB28293.1Uncharacterized OsmC-related protein. (142 aa)    
Predicted Functional Partners:
SCB27158.1
2-oxoisovalerate dehydrogenase E1 component.
    
 0.724
SCB13374.1
2-oxoisovalerate dehydrogenase E1 component.
    
  0.668
SCB10764.1
Acetyltransferase (GNAT) family protein.
    
  0.551
SCB07880.1
acetyl-CoA synthetase.
    
  0.530
SCB31705.1
Acyl-CoA synthetase (NDP forming).
    
  0.530
SCB13246.1
acetyl-CoA carboxylase, biotin carboxylase subunit.
    
  0.529
SCB20787.1
3-methylcrotonyl-CoA carboxylase alpha subunit.
    
  0.529
SCB40351.1
Biotin carboxyl carrier protein /biotin carboxylase.
    
  0.529
SCB28301.1
Hydroxypyruvate reductase.
       0.523
SCB41374.1
Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
    
  0.480
Your Current Organism:
Rhizobium multihospitium
NCBI taxonomy Id: 410764
Other names: CCBAU 83401, HAMBI 2975, LMG 23946, LMG:23946, R. multihospitium, Rhizobium multihospitium Han et al. 2008, Rhizobium sp. CCBAU 83277, Rhizobium sp. CCBAU 83319, Rhizobium sp. CCBAU 83325, Rhizobium sp. CCBAU 83333, Rhizobium sp. CCBAU 83345, Rhizobium sp. CCBAU 83364, Rhizobium sp. CCBAU 83375, Rhizobium sp. CCBAU 83401, Rhizobium sp. CCBAU 83435, Rhizobium sp. CCBAU 83503, Rhizobium sp. CCBAU 83523
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.