Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCB11797.1 | SCB28618.1 | GA0061103_1711 | GA0061103_3982 | Hypothetical protein. | Hypothetical protein. | 0.509 |
SCB11797.1 | SCB28623.1 | GA0061103_1711 | GA0061103_3983 | Hypothetical protein. | Hypothetical protein. | 0.509 |
SCB11797.1 | tolB | GA0061103_1711 | GA0061103_3981 | Hypothetical protein. | TolB protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.750 |
SCB23262.1 | SCB28629.1 | GA0061103_3301 | GA0061103_3984 | Lipoprotein-releasing system permease protein. | Biopolymer transport protein TolR. | 0.698 |
SCB23262.1 | bamD | GA0061103_3301 | GA0061103_3401 | Lipoprotein-releasing system permease protein. | Beta-barrel assembly machine subunit BamD; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.763 |
SCB23262.1 | cpoB | GA0061103_3301 | GA0061103_3979 | Lipoprotein-releasing system permease protein. | Tol-pal system protein YbgF; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family. | 0.465 |
SCB23262.1 | pal | GA0061103_3301 | GA0061103_3980 | Lipoprotein-releasing system permease protein. | Peptidoglycan-associated lipoprotein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.750 |
SCB23262.1 | tolB | GA0061103_3301 | GA0061103_3981 | Lipoprotein-releasing system permease protein. | TolB protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.751 |
SCB23262.1 | tolQ | GA0061103_3301 | GA0061103_3985 | Lipoprotein-releasing system permease protein. | Cell division and transport-associated protein TolQ; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.775 |
SCB28618.1 | SCB11797.1 | GA0061103_3982 | GA0061103_1711 | Hypothetical protein. | Hypothetical protein. | 0.509 |
SCB28618.1 | SCB28623.1 | GA0061103_3982 | GA0061103_3983 | Hypothetical protein. | Hypothetical protein. | 0.803 |
SCB28618.1 | SCB28629.1 | GA0061103_3982 | GA0061103_3984 | Hypothetical protein. | Biopolymer transport protein TolR. | 0.997 |
SCB28618.1 | SCB43298.1 | GA0061103_3982 | GA0061103_6252 | Hypothetical protein. | Outer membrane protein OmpA. | 0.503 |
SCB28618.1 | pal | GA0061103_3982 | GA0061103_3980 | Hypothetical protein. | Peptidoglycan-associated lipoprotein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.647 |
SCB28618.1 | tolB | GA0061103_3982 | GA0061103_3981 | Hypothetical protein. | TolB protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.900 |
SCB28618.1 | tolQ | GA0061103_3982 | GA0061103_3985 | Hypothetical protein. | Cell division and transport-associated protein TolQ; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.994 |
SCB28623.1 | SCB11797.1 | GA0061103_3983 | GA0061103_1711 | Hypothetical protein. | Hypothetical protein. | 0.509 |
SCB28623.1 | SCB28618.1 | GA0061103_3983 | GA0061103_3982 | Hypothetical protein. | Hypothetical protein. | 0.803 |
SCB28623.1 | SCB28629.1 | GA0061103_3983 | GA0061103_3984 | Hypothetical protein. | Biopolymer transport protein TolR. | 0.997 |
SCB28623.1 | SCB43298.1 | GA0061103_3983 | GA0061103_6252 | Hypothetical protein. | Outer membrane protein OmpA. | 0.503 |
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