STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCB29963.1Putative spermidine/putrescine transport system permease protein. (324 aa)    
Predicted Functional Partners:
SCB29972.1
Putative spermidine/putrescine transport system permease protein.
 
  0.988
SCB29948.1
Putative spermidine/putrescine transport system substrate-binding protein.
 
 
  0.973
SCB29955.1
Putative spermidine/putrescine transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
  0.973
SCB13199.1
Spermidine/putrescine transport system permease protein.
 
 
  0.914
SCB18634.1
Putrescine transport system permease protein.
 
  0.909
SCB18613.1
Putrescine transport system substrate-binding protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.
 
 
  0.894
SCB45128.1
Putative spermidine/putrescine transport system permease protein.
 
 
  0.890
SCB37694.1
Putative spermidine/putrescine transport system permease protein.
 
 
  0.875
SCB37708.1
Putative spermidine/putrescine transport system substrate-binding protein.
 
 
  0.870
SCB29978.1
Aminobutyraldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
     0.866
Your Current Organism:
Rhizobium multihospitium
NCBI taxonomy Id: 410764
Other names: CCBAU 83401, HAMBI 2975, LMG 23946, LMG:23946, R. multihospitium, Rhizobium multihospitium Han et al. 2008, Rhizobium sp. CCBAU 83277, Rhizobium sp. CCBAU 83319, Rhizobium sp. CCBAU 83325, Rhizobium sp. CCBAU 83333, Rhizobium sp. CCBAU 83345, Rhizobium sp. CCBAU 83364, Rhizobium sp. CCBAU 83375, Rhizobium sp. CCBAU 83401, Rhizobium sp. CCBAU 83435, Rhizobium sp. CCBAU 83503, Rhizobium sp. CCBAU 83523
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