Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCB09563.1 | SCB09570.1 | GA0061103_1381 | GA0061103_1382 | HlyD family secretion protein. | Type I secretion system ABC transporter, PrtD family. | 0.952 |
SCB09563.1 | SCB31593.1 | GA0061103_1381 | GA0061103_4322 | HlyD family secretion protein. | ATP-binding cassette, subfamily C. | 0.799 |
SCB09563.1 | SCB31767.1 | GA0061103_1381 | GA0061103_4348 | HlyD family secretion protein. | ATP-binding cassette, subfamily C, LapB. | 0.664 |
SCB09563.1 | SCB51004.1 | GA0061103_1381 | GA0061103_0987 | HlyD family secretion protein. | Serralysin. | 0.428 |
SCB09570.1 | SCB09563.1 | GA0061103_1382 | GA0061103_1381 | Type I secretion system ABC transporter, PrtD family. | HlyD family secretion protein. | 0.952 |
SCB09570.1 | SCB31585.1 | GA0061103_1382 | GA0061103_4321 | Type I secretion system ABC transporter, PrtD family. | HlyD family secretion protein. | 0.799 |
SCB09570.1 | SCB31593.1 | GA0061103_1382 | GA0061103_4322 | Type I secretion system ABC transporter, PrtD family. | ATP-binding cassette, subfamily C. | 0.480 |
SCB09570.1 | SCB31767.1 | GA0061103_1382 | GA0061103_4348 | Type I secretion system ABC transporter, PrtD family. | ATP-binding cassette, subfamily C, LapB. | 0.593 |
SCB09570.1 | SCB31773.1 | GA0061103_1382 | GA0061103_4349 | Type I secretion system ABC transporter, PrtD family. | Membrane fusion protein, adhesin transport system. | 0.696 |
SCB09570.1 | SCB51001.1 | GA0061103_1382 | GA0061103_0986 | Type I secretion system ABC transporter, PrtD family. | HlyD family secretion protein. | 0.799 |
SCB09570.1 | SCB51004.1 | GA0061103_1382 | GA0061103_0987 | Type I secretion system ABC transporter, PrtD family. | Serralysin. | 0.492 |
SCB31578.1 | SCB31585.1 | GA0061103_4320 | GA0061103_4321 | Putative transposase. | HlyD family secretion protein. | 0.773 |
SCB31578.1 | SCB31593.1 | GA0061103_4320 | GA0061103_4322 | Putative transposase. | ATP-binding cassette, subfamily C. | 0.746 |
SCB31578.1 | SCB31600.1 | GA0061103_4320 | GA0061103_4323 | Putative transposase. | Hypothetical protein. | 0.505 |
SCB31585.1 | SCB09570.1 | GA0061103_4321 | GA0061103_1382 | HlyD family secretion protein. | Type I secretion system ABC transporter, PrtD family. | 0.799 |
SCB31585.1 | SCB31578.1 | GA0061103_4321 | GA0061103_4320 | HlyD family secretion protein. | Putative transposase. | 0.773 |
SCB31585.1 | SCB31593.1 | GA0061103_4321 | GA0061103_4322 | HlyD family secretion protein. | ATP-binding cassette, subfamily C. | 0.947 |
SCB31585.1 | SCB31600.1 | GA0061103_4321 | GA0061103_4323 | HlyD family secretion protein. | Hypothetical protein. | 0.505 |
SCB31585.1 | SCB31767.1 | GA0061103_4321 | GA0061103_4348 | HlyD family secretion protein. | ATP-binding cassette, subfamily C, LapB. | 0.677 |
SCB31585.1 | SCB51004.1 | GA0061103_4321 | GA0061103_0987 | HlyD family secretion protein. | Serralysin. | 0.537 |
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