STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCB31853.1Hypothetical protein. (325 aa)    
Predicted Functional Partners:
SCB31833.1
Aliphatic nitrilase.
 
   
 0.952
SCB31839.1
Radical SAM protein, MSMEG_0568 family; Non-canonical start codon; manually curated.
 
     0.952
SCB31847.1
Putative N-acetyltransferase, MSMEG_0567 N-terminal domain family.
 
     0.952
SCB31867.1
MSMEG_0570 family protein.
 
     0.952
SCB31860.1
Glycosyltransferase, MSMEG_0565 family.
 
     0.949
SCB31873.1
Putative flavoprotein involved in K+ transport.
 
     0.946
SCB31880.1
Probable biosynthetic protein, Pnap_2097 family.
 
     0.940
SCB31827.1
MSMEG_0572 family protein.
 
   
 0.924
SCB50437.1
Aliphatic nitrilase.
 
   
 0.753
SCB31820.1
DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain.
 
     0.736
Your Current Organism:
Rhizobium multihospitium
NCBI taxonomy Id: 410764
Other names: CCBAU 83401, HAMBI 2975, LMG 23946, LMG:23946, R. multihospitium, Rhizobium multihospitium Han et al. 2008, Rhizobium sp. CCBAU 83277, Rhizobium sp. CCBAU 83319, Rhizobium sp. CCBAU 83325, Rhizobium sp. CCBAU 83333, Rhizobium sp. CCBAU 83345, Rhizobium sp. CCBAU 83364, Rhizobium sp. CCBAU 83375, Rhizobium sp. CCBAU 83401, Rhizobium sp. CCBAU 83435, Rhizobium sp. CCBAU 83503, Rhizobium sp. CCBAU 83523
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