Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCB09988.1 | SCB35872.1 | GA0061103_1439 | GA0061103_4983 | Glyoxalase-like domain-containing protein. | Transcriptional regulator, TetR family. | 0.417 |
SCB20735.1 | SCB30619.1 | GA0061103_2904 | GA0061103_4297 | Phosphoglycerate kinase. | DNA-binding transcriptional regulator, MarR family. | 0.555 |
SCB20735.1 | SCB35872.1 | GA0061103_2904 | GA0061103_4983 | Phosphoglycerate kinase. | Transcriptional regulator, TetR family. | 0.486 |
SCB20735.1 | SCB44832.1 | GA0061103_2904 | GA0061103_6591 | Phosphoglycerate kinase. | Predicted amidohydrolase. | 0.411 |
SCB30619.1 | SCB20735.1 | GA0061103_4297 | GA0061103_2904 | DNA-binding transcriptional regulator, MarR family. | Phosphoglycerate kinase. | 0.555 |
SCB30619.1 | SCB35872.1 | GA0061103_4297 | GA0061103_4983 | DNA-binding transcriptional regulator, MarR family. | Transcriptional regulator, TetR family. | 0.563 |
SCB33511.1 | SCB35872.1 | GA0061103_4632 | GA0061103_4983 | Transcriptional regulator, TetR family. | Transcriptional regulator, TetR family. | 0.548 |
SCB35866.1 | SCB35872.1 | GA0061103_4982 | GA0061103_4983 | DoxX-like family protein. | Transcriptional regulator, TetR family. | 0.526 |
SCB35872.1 | SCB09988.1 | GA0061103_4983 | GA0061103_1439 | Transcriptional regulator, TetR family. | Glyoxalase-like domain-containing protein. | 0.417 |
SCB35872.1 | SCB20735.1 | GA0061103_4983 | GA0061103_2904 | Transcriptional regulator, TetR family. | Phosphoglycerate kinase. | 0.486 |
SCB35872.1 | SCB30619.1 | GA0061103_4983 | GA0061103_4297 | Transcriptional regulator, TetR family. | DNA-binding transcriptional regulator, MarR family. | 0.563 |
SCB35872.1 | SCB33511.1 | GA0061103_4983 | GA0061103_4632 | Transcriptional regulator, TetR family. | Transcriptional regulator, TetR family. | 0.548 |
SCB35872.1 | SCB35866.1 | GA0061103_4983 | GA0061103_4982 | Transcriptional regulator, TetR family. | DoxX-like family protein. | 0.526 |
SCB35872.1 | SCB44832.1 | GA0061103_4983 | GA0061103_6591 | Transcriptional regulator, TetR family. | Predicted amidohydrolase. | 0.402 |
SCB44832.1 | SCB20735.1 | GA0061103_6591 | GA0061103_2904 | Predicted amidohydrolase. | Phosphoglycerate kinase. | 0.411 |
SCB44832.1 | SCB35872.1 | GA0061103_6591 | GA0061103_4983 | Predicted amidohydrolase. | Transcriptional regulator, TetR family. | 0.402 |