STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCB38356.1Flp pilus assembly protein TadD, contains TPR repeats. (276 aa)    
Predicted Functional Partners:
SCB38334.1
Pilus assembly protein CpaE.
 
  
 0.840
SCB38317.1
Prepilin peptidase CpaA.
 
   
 0.838
SCB38326.1
Pilus assembly protein CpaC; Belongs to the bacterial secretin family.
 
  
 0.804
SCB38344.1
Tight adherence protein B.
 
  
 0.803
SCB38347.1
Tight adherence protein C.
 
  
 0.803
SCB38304.1
Flp pilus assembly protein TadG.
 
   
 0.797
SCB38329.1
Pilus assembly protein CpaD.
 
     0.797
SCB38300.1
Flp pilus assembly protein TadG.
 
   
 0.796
SCB38321.1
Pilus assembly protein CpaB.
 
  
 0.792
SCB38309.1
Pilus formation protein N terminal region.
 
  
 0.781
Your Current Organism:
Rhizobium multihospitium
NCBI taxonomy Id: 410764
Other names: CCBAU 83401, HAMBI 2975, LMG 23946, LMG:23946, R. multihospitium, Rhizobium multihospitium Han et al. 2008, Rhizobium sp. CCBAU 83277, Rhizobium sp. CCBAU 83319, Rhizobium sp. CCBAU 83325, Rhizobium sp. CCBAU 83333, Rhizobium sp. CCBAU 83345, Rhizobium sp. CCBAU 83364, Rhizobium sp. CCBAU 83375, Rhizobium sp. CCBAU 83401, Rhizobium sp. CCBAU 83435, Rhizobium sp. CCBAU 83503, Rhizobium sp. CCBAU 83523
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.