STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCB39787.1Hydrophobe/amphiphile efflux-1 (HAE1) family protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1024 aa)    
Predicted Functional Partners:
SCB39782.1
RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  
  0.947
SCB27476.1
HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  0.858
SCB33089.1
RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  0.856
SCB50845.1
RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.746
SCB21314.1
RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.702
SCB32056.1
Membrane fusion protein, multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.648
SCB30402.1
RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.640
secF
SecD/SecF fusion protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.
  
  
 0.634
SCB34294.1
RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.631
secD
SecD/SecF fusion protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.
  
  
 0.620
Your Current Organism:
Rhizobium multihospitium
NCBI taxonomy Id: 410764
Other names: CCBAU 83401, HAMBI 2975, LMG 23946, LMG:23946, R. multihospitium, Rhizobium multihospitium Han et al. 2008, Rhizobium sp. CCBAU 83277, Rhizobium sp. CCBAU 83319, Rhizobium sp. CCBAU 83325, Rhizobium sp. CCBAU 83333, Rhizobium sp. CCBAU 83345, Rhizobium sp. CCBAU 83364, Rhizobium sp. CCBAU 83375, Rhizobium sp. CCBAU 83401, Rhizobium sp. CCBAU 83435, Rhizobium sp. CCBAU 83503, Rhizobium sp. CCBAU 83523
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