Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCB12440.1 | SCB20282.1 | GA0061103_1806 | GA0061103_2831 | Putative two-component system response regulator. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.906 |
SCB12440.1 | SCB20679.1 | GA0061103_1806 | GA0061103_2897 | Putative two-component system response regulator. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.738 |
SCB12440.1 | SCB26825.1 | GA0061103_1806 | GA0061103_3719 | Putative two-component system response regulator. | Signal transduction histidine kinase. | 0.908 |
SCB12440.1 | SCB27954.1 | GA0061103_1806 | GA0061103_3891 | Putative two-component system response regulator. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.868 |
SCB12440.1 | SCB29566.1 | GA0061103_1806 | GA0061103_4145 | Putative two-component system response regulator. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.674 |
SCB12440.1 | SCB32815.1 | GA0061103_1806 | GA0061103_4520 | Putative two-component system response regulator. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.661 |
SCB12440.1 | SCB36471.1 | GA0061103_1806 | GA0061103_5084 | Putative two-component system response regulator. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.647 |
SCB12440.1 | SCB37723.1 | GA0061103_1806 | GA0061103_5175 | Putative two-component system response regulator. | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant); Manually curated. | 0.444 |
SCB12440.1 | SCB43341.1 | GA0061103_1806 | GA0061103_6264 | Putative two-component system response regulator. | Diguanylate cyclase. | 0.882 |
SCB12440.1 | SCB48970.1 | GA0061103_1806 | GA0061103_0482 | Putative two-component system response regulator. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.889 |
SCB20282.1 | SCB12440.1 | GA0061103_2831 | GA0061103_1806 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | Putative two-component system response regulator. | 0.906 |
SCB20282.1 | SCB20679.1 | GA0061103_2831 | GA0061103_2897 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.961 |
SCB20282.1 | SCB26825.1 | GA0061103_2831 | GA0061103_3719 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | Signal transduction histidine kinase. | 0.994 |
SCB20282.1 | SCB27954.1 | GA0061103_2831 | GA0061103_3891 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.987 |
SCB20282.1 | SCB29566.1 | GA0061103_2831 | GA0061103_4145 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.987 |
SCB20282.1 | SCB32815.1 | GA0061103_2831 | GA0061103_4520 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.986 |
SCB20282.1 | SCB36471.1 | GA0061103_2831 | GA0061103_5084 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.986 |
SCB20282.1 | SCB37723.1 | GA0061103_2831 | GA0061103_5175 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant); Manually curated. | 0.833 |
SCB20282.1 | SCB43341.1 | GA0061103_2831 | GA0061103_6264 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | Diguanylate cyclase. | 0.791 |
SCB20282.1 | SCB48970.1 | GA0061103_2831 | GA0061103_0482 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.994 |
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