STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCB43645.1Monothiol glutaredoxin; Belongs to the glutaredoxin family. Monothiol subfamily. (111 aa)    
Predicted Functional Partners:
SCB43659.1
Transcriptional regulator, BolA protein family; Belongs to the BolA/IbaG family.
 
 
 0.987
SCB46365.1
BolA protein; Belongs to the BolA/IbaG family.
 
 
 0.970
SCB43841.1
Iron-sulfur cluster assembly protein; Belongs to the HesB/IscA family.
 
 0.896
SCB41918.1
Iron-sulfur cluster assembly accessory protein; Belongs to the HesB/IscA family.
 
 0.889
thrS
Ser-tRNA(Thr) hydrolase /threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).
  
 
 
 0.831
SCB24934.1
DnaJ like chaperone protein.
     
 0.791
gshB
Glutathione synthase; Belongs to the prokaryotic GSH synthase family.
  
     0.636
SCB41229.1
2-octaprenyl-6-methoxyphenol hydroxylase.
  
     0.610
rlmE
23S rRNA (uridine2552-2'-O)-methyltransferase; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit.
  
     0.606
SCB39417.1
Fe-S cluster biogenesis protein NfuA, 4Fe-4S-binding domain.
  
 
 0.598
Your Current Organism:
Rhizobium multihospitium
NCBI taxonomy Id: 410764
Other names: CCBAU 83401, HAMBI 2975, LMG 23946, LMG:23946, R. multihospitium, Rhizobium multihospitium Han et al. 2008, Rhizobium sp. CCBAU 83277, Rhizobium sp. CCBAU 83319, Rhizobium sp. CCBAU 83325, Rhizobium sp. CCBAU 83333, Rhizobium sp. CCBAU 83345, Rhizobium sp. CCBAU 83364, Rhizobium sp. CCBAU 83375, Rhizobium sp. CCBAU 83401, Rhizobium sp. CCBAU 83435, Rhizobium sp. CCBAU 83503, Rhizobium sp. CCBAU 83523
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