Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCB10120.1 | SCB18569.1 | GA0061103_1456 | GA0061103_2586 | Hypothetical protein. | Hypothetical protein. | 0.420 |
SCB10120.1 | SCB43904.1 | GA0061103_1456 | GA0061103_6403 | Hypothetical protein. | Hypothetical protein; Belongs to the UPF0178 family. | 0.417 |
SCB18569.1 | SCB10120.1 | GA0061103_2586 | GA0061103_1456 | Hypothetical protein. | Hypothetical protein. | 0.420 |
SCB18569.1 | SCB43904.1 | GA0061103_2586 | GA0061103_6403 | Hypothetical protein. | Hypothetical protein; Belongs to the UPF0178 family. | 0.435 |
SCB43897.1 | SCB43901.1 | GA0061103_6401 | GA0061103_6402 | Quaternary ammonium compound-resistance protein SugE. | S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde. | 0.491 |
SCB43897.1 | SCB43904.1 | GA0061103_6401 | GA0061103_6403 | Quaternary ammonium compound-resistance protein SugE. | Hypothetical protein; Belongs to the UPF0178 family. | 0.491 |
SCB43901.1 | SCB43897.1 | GA0061103_6402 | GA0061103_6401 | S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde. | Quaternary ammonium compound-resistance protein SugE. | 0.491 |
SCB43901.1 | SCB43904.1 | GA0061103_6402 | GA0061103_6403 | S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde. | Hypothetical protein; Belongs to the UPF0178 family. | 0.800 |
SCB43901.1 | SCB43909.1 | GA0061103_6402 | GA0061103_6404 | S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde. | Zinc-binding dehydrogenase; Partial gene; manually curated. | 0.995 |
SCB43904.1 | SCB10120.1 | GA0061103_6403 | GA0061103_1456 | Hypothetical protein; Belongs to the UPF0178 family. | Hypothetical protein. | 0.417 |
SCB43904.1 | SCB18569.1 | GA0061103_6403 | GA0061103_2586 | Hypothetical protein; Belongs to the UPF0178 family. | Hypothetical protein. | 0.435 |
SCB43904.1 | SCB43897.1 | GA0061103_6403 | GA0061103_6401 | Hypothetical protein; Belongs to the UPF0178 family. | Quaternary ammonium compound-resistance protein SugE. | 0.491 |
SCB43904.1 | SCB43901.1 | GA0061103_6403 | GA0061103_6402 | Hypothetical protein; Belongs to the UPF0178 family. | S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde. | 0.800 |
SCB43904.1 | SCB43909.1 | GA0061103_6403 | GA0061103_6404 | Hypothetical protein; Belongs to the UPF0178 family. | Zinc-binding dehydrogenase; Partial gene; manually curated. | 0.595 |
SCB43909.1 | SCB43901.1 | GA0061103_6404 | GA0061103_6402 | Zinc-binding dehydrogenase; Partial gene; manually curated. | S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde. | 0.995 |
SCB43909.1 | SCB43904.1 | GA0061103_6404 | GA0061103_6403 | Zinc-binding dehydrogenase; Partial gene; manually curated. | Hypothetical protein; Belongs to the UPF0178 family. | 0.595 |