STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCB44223.1Uncharacterized conserved protein, DUF849 family. (259 aa)    
Predicted Functional Partners:
SCB44233.1
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
     0.726
SCB44228.1
Transcriptional regulator, RpiR family.
 
     0.705
lcdH
Carnitine 3-dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-carnitine to 3- dehydrocarnitine.
 
 
 0.645
SCB12072.1
3-oxoadipate CoA-transferase, alpha subunit.
 
  
 0.616
SCB12080.1
3-oxoadipate CoA-transferase beta subunit.
 
  
  0.609
SCB46788.1
3-oxoacid CoA-transferase subunit B.
 
  
  0.592
SCB36707.1
Transcriptional regulator, XRE family with cupin sensor.
 
    0.574
SCB46784.1
3-oxoacid CoA-transferase subunit A.
    
 0.540
SCB47461.1
Kynurenine formamidase.
  
    0.533
SCB28102.1
Kynurenine formamidase.
  
    0.533
Your Current Organism:
Rhizobium multihospitium
NCBI taxonomy Id: 410764
Other names: CCBAU 83401, HAMBI 2975, LMG 23946, LMG:23946, R. multihospitium, Rhizobium multihospitium Han et al. 2008, Rhizobium sp. CCBAU 83277, Rhizobium sp. CCBAU 83319, Rhizobium sp. CCBAU 83325, Rhizobium sp. CCBAU 83333, Rhizobium sp. CCBAU 83345, Rhizobium sp. CCBAU 83364, Rhizobium sp. CCBAU 83375, Rhizobium sp. CCBAU 83401, Rhizobium sp. CCBAU 83435, Rhizobium sp. CCBAU 83503, Rhizobium sp. CCBAU 83523
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.