Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCB13991.1 | SCB44749.1 | GA0061103_2057 | GA0061103_6563 | Cytochrome P450. | Ferredoxin-NADP reductase. | 0.818 |
SCB44734.1 | SCB44742.1 | GA0061103_6559 | GA0061103_6561 | Aminomethyltransferase; Belongs to the GcvT family. | Trimethylamine monooxygenase. | 0.793 |
SCB44734.1 | SCB44745.1 | GA0061103_6559 | GA0061103_6562 | Aminomethyltransferase; Belongs to the GcvT family. | Protein of unknown function. | 0.905 |
SCB44734.1 | SCB44749.1 | GA0061103_6559 | GA0061103_6563 | Aminomethyltransferase; Belongs to the GcvT family. | Ferredoxin-NADP reductase. | 0.781 |
SCB44734.1 | SCB44753.1 | GA0061103_6559 | GA0061103_6564 | Aminomethyltransferase; Belongs to the GcvT family. | Hypothetical protein. | 0.941 |
SCB44734.1 | SCB44757.1 | GA0061103_6559 | GA0061103_6565 | Aminomethyltransferase; Belongs to the GcvT family. | Aminomethyltransferase; Belongs to the GcvT family. | 0.717 |
SCB44734.1 | SCB44770.1 | GA0061103_6559 | GA0061103_6568 | Aminomethyltransferase; Belongs to the GcvT family. | Gamma-glutamylmethylamide synthetase; Belongs to the glutamine synthetase family. | 0.893 |
SCB44734.1 | SCB44773.1 | GA0061103_6559 | GA0061103_6569 | Aminomethyltransferase; Belongs to the GcvT family. | N-methylglutamate synthase subunit C precursor; Belongs to the glutamate synthase family. | 0.907 |
SCB44734.1 | SCB44775.1 | GA0061103_6559 | GA0061103_6570 | Aminomethyltransferase; Belongs to the GcvT family. | N-methylglutamate synthase subunit B. | 0.907 |
SCB44734.1 | SCB44778.1 | GA0061103_6559 | GA0061103_6571 | Aminomethyltransferase; Belongs to the GcvT family. | N-methylglutamate synthase subunit A. | 0.910 |
SCB44742.1 | SCB44734.1 | GA0061103_6561 | GA0061103_6559 | Trimethylamine monooxygenase. | Aminomethyltransferase; Belongs to the GcvT family. | 0.793 |
SCB44742.1 | SCB44745.1 | GA0061103_6561 | GA0061103_6562 | Trimethylamine monooxygenase. | Protein of unknown function. | 0.907 |
SCB44742.1 | SCB44749.1 | GA0061103_6561 | GA0061103_6563 | Trimethylamine monooxygenase. | Ferredoxin-NADP reductase. | 0.871 |
SCB44742.1 | SCB44753.1 | GA0061103_6561 | GA0061103_6564 | Trimethylamine monooxygenase. | Hypothetical protein. | 0.893 |
SCB44742.1 | SCB44757.1 | GA0061103_6561 | GA0061103_6565 | Trimethylamine monooxygenase. | Aminomethyltransferase; Belongs to the GcvT family. | 0.878 |
SCB44742.1 | SCB44770.1 | GA0061103_6561 | GA0061103_6568 | Trimethylamine monooxygenase. | Gamma-glutamylmethylamide synthetase; Belongs to the glutamine synthetase family. | 0.738 |
SCB44742.1 | SCB44773.1 | GA0061103_6561 | GA0061103_6569 | Trimethylamine monooxygenase. | N-methylglutamate synthase subunit C precursor; Belongs to the glutamate synthase family. | 0.796 |
SCB44742.1 | SCB44775.1 | GA0061103_6561 | GA0061103_6570 | Trimethylamine monooxygenase. | N-methylglutamate synthase subunit B. | 0.790 |
SCB44742.1 | SCB44778.1 | GA0061103_6561 | GA0061103_6571 | Trimethylamine monooxygenase. | N-methylglutamate synthase subunit A. | 0.789 |
SCB44745.1 | SCB44734.1 | GA0061103_6562 | GA0061103_6559 | Protein of unknown function. | Aminomethyltransferase; Belongs to the GcvT family. | 0.905 |
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