Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCB20080.1 | SCB20806.1 | GA0061103_2798 | GA0061103_2917 | Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family. | Twin-arg-translocated uncharacterized repeat-containing protein. | 0.730 |
SCB20080.1 | SCB22744.1 | GA0061103_2798 | GA0061103_3227 | Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family. | O-antigen ligase. | 0.776 |
SCB20080.1 | SCB22751.1 | GA0061103_2798 | GA0061103_3228 | Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family. | Undecaprenyl-phosphate glucose phosphotransferase. | 0.537 |
SCB20080.1 | SCB22757.1 | GA0061103_2798 | GA0061103_3229 | Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family. | Glycosyltransferase involved in cell wall bisynthesis. | 0.771 |
SCB20080.1 | SCB22769.1 | GA0061103_2798 | GA0061103_3231 | Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family. | Exopolysaccharide transport protein family. | 0.779 |
SCB20080.1 | SCB22775.1 | GA0061103_2798 | GA0061103_3232 | Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family. | Acetyltransferase involved in cellulose biosynthesis, CelD/BcsL family. | 0.791 |
SCB20080.1 | SCB29239.1 | GA0061103_2798 | GA0061103_4091 | Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family. | Hypothetical protein. | 0.730 |
SCB20080.1 | SCB40479.1 | GA0061103_2798 | GA0061103_5643 | Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family. | PilZ domain-containing protein; Manually curated. | 0.754 |
SCB20080.1 | SCB46545.1 | GA0061103_2798 | GA0061103_6975 | Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family. | Acetyltransferase (GNAT) domain-containing protein. | 0.481 |
SCB20080.1 | SCB46550.1 | GA0061103_2798 | GA0061103_6976 | Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family. | Membrane protein involved in the export of O-antigen and teichoic acid. | 0.774 |
SCB20806.1 | SCB20080.1 | GA0061103_2917 | GA0061103_2798 | Twin-arg-translocated uncharacterized repeat-containing protein. | Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family. | 0.730 |
SCB20806.1 | SCB22744.1 | GA0061103_2917 | GA0061103_3227 | Twin-arg-translocated uncharacterized repeat-containing protein. | O-antigen ligase. | 0.772 |
SCB20806.1 | SCB22751.1 | GA0061103_2917 | GA0061103_3228 | Twin-arg-translocated uncharacterized repeat-containing protein. | Undecaprenyl-phosphate glucose phosphotransferase. | 0.417 |
SCB20806.1 | SCB22757.1 | GA0061103_2917 | GA0061103_3229 | Twin-arg-translocated uncharacterized repeat-containing protein. | Glycosyltransferase involved in cell wall bisynthesis. | 0.710 |
SCB20806.1 | SCB22769.1 | GA0061103_2917 | GA0061103_3231 | Twin-arg-translocated uncharacterized repeat-containing protein. | Exopolysaccharide transport protein family. | 0.639 |
SCB20806.1 | SCB22775.1 | GA0061103_2917 | GA0061103_3232 | Twin-arg-translocated uncharacterized repeat-containing protein. | Acetyltransferase involved in cellulose biosynthesis, CelD/BcsL family. | 0.678 |
SCB20806.1 | SCB40479.1 | GA0061103_2917 | GA0061103_5643 | Twin-arg-translocated uncharacterized repeat-containing protein. | PilZ domain-containing protein; Manually curated. | 0.764 |
SCB20806.1 | SCB46550.1 | GA0061103_2917 | GA0061103_6976 | Twin-arg-translocated uncharacterized repeat-containing protein. | Membrane protein involved in the export of O-antigen and teichoic acid. | 0.739 |
SCB22744.1 | SCB20080.1 | GA0061103_3227 | GA0061103_2798 | O-antigen ligase. | Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family. | 0.776 |
SCB22744.1 | SCB20806.1 | GA0061103_3227 | GA0061103_2917 | O-antigen ligase. | Twin-arg-translocated uncharacterized repeat-containing protein. | 0.772 |
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