Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| GFO_0093 | rpoN | GFO_0093 | GFO_0094 | Conserved hypothetical protein, membrane. | RNA polymerase sigma-54 factor. | 0.822 |
| GFO_0510 | rpoN | GFO_0510 | GFO_0094 | Two-component system response regulator containing sigma-54 interaction domain. | RNA polymerase sigma-54 factor. | 0.800 |
| GFO_0649 | rpoA | GFO_0649 | GFO_2814 | Conserved hypothetical protein. | DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.996 |
| GFO_0649 | rpoB | GFO_0649 | GFO_2370 | Conserved hypothetical protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.990 |
| GFO_0649 | rpoC | GFO_0649 | GFO_2369 | Conserved hypothetical protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.981 |
| GFO_0649 | rpoN | GFO_0649 | GFO_0094 | Conserved hypothetical protein. | RNA polymerase sigma-54 factor. | 0.880 |
| GFO_0718 | rpoN | GFO_0718 | GFO_0094 | Two-component system response regulator containing sigma-54 interaction domain. | RNA polymerase sigma-54 factor. | 0.794 |
| GFO_0728 | GFO_3053 | GFO_0728 | GFO_3053 | Two-component system response regulator containing sigma-54 interaction domain. | Two-component system response regulator containing sigma-54 interaction domain. | 0.910 |
| GFO_0728 | rpoN | GFO_0728 | GFO_0094 | Two-component system response regulator containing sigma-54 interaction domain. | RNA polymerase sigma-54 factor. | 0.800 |
| GFO_3053 | GFO_0728 | GFO_3053 | GFO_0728 | Two-component system response regulator containing sigma-54 interaction domain. | Two-component system response regulator containing sigma-54 interaction domain. | 0.910 |
| GFO_3053 | rpoN | GFO_3053 | GFO_0094 | Two-component system response regulator containing sigma-54 interaction domain. | RNA polymerase sigma-54 factor. | 0.799 |
| GFO_3591 | rpoN | GFO_3591 | GFO_0094 | Sigma-54 dependent transcriptional regulator. | RNA polymerase sigma-54 factor. | 0.859 |
| rpoA | GFO_0649 | GFO_2814 | GFO_0649 | DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Conserved hypothetical protein. | 0.996 |
| rpoA | rpoB | GFO_2814 | GFO_2370 | DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.998 |
| rpoA | rpoC | GFO_2814 | GFO_2369 | DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.998 |
| rpoA | rpoN | GFO_2814 | GFO_0094 | DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | RNA polymerase sigma-54 factor. | 0.931 |
| rpoB | GFO_0649 | GFO_2370 | GFO_0649 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Conserved hypothetical protein. | 0.990 |
| rpoB | rpoA | GFO_2370 | GFO_2814 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.998 |
| rpoB | rpoC | GFO_2370 | GFO_2369 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
| rpoB | rpoN | GFO_2370 | GFO_0094 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | RNA polymerase sigma-54 factor. | 0.916 |
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