Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| GFO_0170 | GFO_0172 | GFO_0170 | GFO_0172 | Cytochrome P450. | AraC family transcriptional regulator protein. | 0.519 |
| GFO_0170 | mcrA | GFO_0170 | GFO_0173 | Cytochrome P450. | Mitomycin radical oxidase-like protein. | 0.452 |
| GFO_0172 | GFO_0170 | GFO_0172 | GFO_0170 | AraC family transcriptional regulator protein. | Cytochrome P450. | 0.519 |
| GFO_0172 | mcrA | GFO_0172 | GFO_0173 | AraC family transcriptional regulator protein. | Mitomycin radical oxidase-like protein. | 0.673 |
| GFO_1812 | atpD-2 | GFO_1812 | GFO_3548 | UbiA family prenyltransferase. | ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. | 0.560 |
| GFO_1812 | mcrA | GFO_1812 | GFO_0173 | UbiA family prenyltransferase. | Mitomycin radical oxidase-like protein. | 0.450 |
| GFO_2260 | mcrA | GFO_2260 | GFO_0173 | Glutamine cyclotransferase. | Mitomycin radical oxidase-like protein. | 0.418 |
| GFO_3628 | atpD-2 | GFO_3628 | GFO_3548 | Prenyltransferase family protein. | ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. | 0.560 |
| GFO_3628 | mcrA | GFO_3628 | GFO_0173 | Prenyltransferase family protein. | Mitomycin radical oxidase-like protein. | 0.450 |
| atpD-2 | GFO_1812 | GFO_3548 | GFO_1812 | ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. | UbiA family prenyltransferase. | 0.560 |
| atpD-2 | GFO_3628 | GFO_3548 | GFO_3628 | ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. | Prenyltransferase family protein. | 0.560 |
| atpD-2 | gltB | GFO_3548 | GFO_2908 | ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. | Glutamate synthase (NADPH) large subunit. | 0.533 |
| atpD-2 | maeB | GFO_3548 | GFO_0179 | ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. | NADP-dependent malic enzyme. | 0.477 |
| atpD-2 | mcrA | GFO_3548 | GFO_0173 | ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. | Mitomycin radical oxidase-like protein. | 0.470 |
| etfA | etfB | GFO_0292 | GFO_0293 | Electron transfer flavoprotein subunit alpha. | Electron transfer flavoprotein subunit beta. | 0.999 |
| etfA | mcrA | GFO_0292 | GFO_0173 | Electron transfer flavoprotein subunit alpha. | Mitomycin radical oxidase-like protein. | 0.639 |
| etfB | etfA | GFO_0293 | GFO_0292 | Electron transfer flavoprotein subunit beta. | Electron transfer flavoprotein subunit alpha. | 0.999 |
| etfB | mcrA | GFO_0293 | GFO_0173 | Electron transfer flavoprotein subunit beta. | Mitomycin radical oxidase-like protein. | 0.639 |
| gltB | atpD-2 | GFO_2908 | GFO_3548 | Glutamate synthase (NADPH) large subunit. | ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. | 0.533 |
| gltB | maeB | GFO_2908 | GFO_0179 | Glutamate synthase (NADPH) large subunit. | NADP-dependent malic enzyme. | 0.588 |
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