STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sirFerredoxin-sulfite reductase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. (697 aa)    
Predicted Functional Partners:
corA
uroporphyrin-III C-methyltransferase.
 
  
 0.989
cysH
(phospho)adenosine phosphosulfate reductase.
 
 
 0.988
cysN
Sulfate adenylyltransferase subunit 1; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
 
  
 0.964
GFO_0329
Siroheme synthase.
 
  
 0.947
metZ
O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide.
  
 0.938
cysD
Sulfate adenylyltransferase subunit 2.
 
  
 0.843
GFO_3277
PaaE-like NADH oxidoreductase-possibly involved in phenylacetic acid degradation.
  
 
 0.766
fdxB
2Fe-2S ferredoxin.
 
 
 0.726
GFO_2454
Phage-related protein.
  
  
 0.716
trxB-2
Thioredoxin reductase.
 
  
 0.705
Your Current Organism:
Gramella forsetii
NCBI taxonomy Id: 411154
Other names: Cytophaga sp. KT0803, G. forsetii KT0803, Gramella forsetii KT0803, Gramella forsetii str. KT0803, Gramella forsetii strain KT0803
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.