STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GFO_0366Fibronectin type III repeat domain containing secreted glycoside hydrolase, family 43; Belongs to the glycosyl hydrolase 43 family. (600 aa)    
Predicted Functional Partners:
GFO_0364
Conserved hypothetical protein.
 
     0.923
GFO_0365
Secreted alpha/beta fold hydrolase-possibly a phospholipase/carboxylesterase.
 
     0.922
GFO_0363
Conserved hypothetical protein, membrane or secreted.
 
     0.812
GFO_0370
Secreted lipase/esterase.
 
     0.741
bglX
Glycoside hydrolase, family 3-likely beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.
 
   
 0.731
GFO_0362
SusD/RagB family protein containing tetratricopeptide repeat.
 
     0.652
GFO_0360
Sensor/regulator hybrid.
 
     0.633
GFO_0359
Sulfatase.
 
     0.552
GFO_0361
TonB-dependent outer membrane receptor.
 
     0.542
GFO_2555
Endonuclease/exonuclease/phosphatase family protein.
 
     0.538
Your Current Organism:
Gramella forsetii
NCBI taxonomy Id: 411154
Other names: Cytophaga sp. KT0803, G. forsetii KT0803, Gramella forsetii KT0803, Gramella forsetii str. KT0803, Gramella forsetii strain KT0803
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.