STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GFO_0565Glycosyl transferase, group 1. (383 aa)    
Predicted Functional Partners:
GFO_0567
Glycosyl transferase, family 2.
 
     0.946
GFO_0574
Hypothetical protein-possible UDP-glycosyltransferase.
 
  
 0.934
GFO_0576
Glycosyl transferase, family 2.
 
    0.934
GFO_0575
Glycosyl transferase, group 1.
 
     0.919
GFO_0577
Glycosyl transferase, family 2.
 
    0.915
GFO_0580
Glycosyl transferase, group 1.
 
     0.877
GFO_0582
Conserved hypothetical protein, membrane.
 
  
 0.851
GFO_0571
UDP-N-acetylglucosamine 2-epimerase.
  
  
 0.829
GFO_0581
Glycosyl transferase, group 1.
 
     0.815
GFO_0543
Conserved hypothetical protein.
 
    0.795
Your Current Organism:
Gramella forsetii
NCBI taxonomy Id: 411154
Other names: Cytophaga sp. KT0803, G. forsetii KT0803, Gramella forsetii KT0803, Gramella forsetii str. KT0803, Gramella forsetii strain KT0803
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.