STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GFO_0566Conserved hypothetical protein. (388 aa)    
Predicted Functional Partners:
GFO_0569
N-acetylneuraminate synthase.
  
  
 0.791
GFO_0565
Glycosyl transferase, group 1.
  
   0.786
GFO_0571
UDP-N-acetylglucosamine 2-epimerase.
  
  
 0.784
GFO_0567
Glycosyl transferase, family 2.
  
    0.776
neuA
N-acylneuraminate cytidylyltransferase.
       0.772
GFO_0568
Hypothetical protein-possible methyltransferase.
       0.768
GFO_0570
Conserved hypothetical protein-possible methyltransferase.
       0.768
asnB
Asparagine synthetase [glutamine-hydrolyzing].
       0.768
GFO_0575
Glycosyl transferase, group 1.
  
   0.729
GFO_0576
Glycosyl transferase, family 2.
  
    0.715
Your Current Organism:
Gramella forsetii
NCBI taxonomy Id: 411154
Other names: Cytophaga sp. KT0803, G. forsetii KT0803, Gramella forsetii KT0803, Gramella forsetii str. KT0803, Gramella forsetii strain KT0803
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.