Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GFO_0636 | GFO_0754 | GFO_0636 | GFO_0754 | GNAT family acetyltransferase. | GNAT family acetyltransferase. | 0.889 |
GFO_0753 | GFO_0754 | GFO_0753 | GFO_0754 | Conserved hypothetical protein-possible metallo-hydrolase/oxidoreductase. | GNAT family acetyltransferase. | 0.611 |
GFO_0753 | GFO_0756 | GFO_0753 | GFO_0756 | Conserved hypothetical protein-possible metallo-hydrolase/oxidoreductase. | Conserved hypothetical protein, membrane. | 0.440 |
GFO_0753 | treA | GFO_0753 | GFO_0755 | Conserved hypothetical protein-possible metallo-hydrolase/oxidoreductase. | Trehalase. | 0.426 |
GFO_0754 | GFO_0636 | GFO_0754 | GFO_0636 | GNAT family acetyltransferase. | GNAT family acetyltransferase. | 0.889 |
GFO_0754 | GFO_0753 | GFO_0754 | GFO_0753 | GNAT family acetyltransferase. | Conserved hypothetical protein-possible metallo-hydrolase/oxidoreductase. | 0.611 |
GFO_0754 | GFO_0756 | GFO_0754 | GFO_0756 | GNAT family acetyltransferase. | Conserved hypothetical protein, membrane. | 0.543 |
GFO_0754 | cmk | GFO_0754 | GFO_1852 | GNAT family acetyltransferase. | Cytidylate kinase. | 0.632 |
GFO_0754 | treA | GFO_0754 | GFO_0755 | GNAT family acetyltransferase. | Trehalase. | 0.543 |
GFO_0756 | GFO_0753 | GFO_0756 | GFO_0753 | Conserved hypothetical protein, membrane. | Conserved hypothetical protein-possible metallo-hydrolase/oxidoreductase. | 0.440 |
GFO_0756 | GFO_0754 | GFO_0756 | GFO_0754 | Conserved hypothetical protein, membrane. | GNAT family acetyltransferase. | 0.543 |
GFO_0756 | treA | GFO_0756 | GFO_0755 | Conserved hypothetical protein, membrane. | Trehalase. | 0.773 |
cmk | GFO_0754 | GFO_1852 | GFO_0754 | Cytidylate kinase. | GNAT family acetyltransferase. | 0.632 |
treA | GFO_0753 | GFO_0755 | GFO_0753 | Trehalase. | Conserved hypothetical protein-possible metallo-hydrolase/oxidoreductase. | 0.426 |
treA | GFO_0754 | GFO_0755 | GFO_0754 | Trehalase. | GNAT family acetyltransferase. | 0.543 |
treA | GFO_0756 | GFO_0755 | GFO_0756 | Trehalase. | Conserved hypothetical protein, membrane. | 0.773 |