STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GFO_0811Conserved hypothetical protein. (104 aa)    
Predicted Functional Partners:
ftsQ
FtsQ-like cell division protein.
 
 
 
 0.958
udk
Uridine kinase.
       0.784
mutA
methylmalonyl-CoA mutase small subunit.
       0.733
mutB
methylmalonyl-CoA mutase large subunit.
       0.732
GFO_3016
Conserved hypothetical protein; Belongs to the arginase family.
  
     0.719
GFO_1876
Conserved hypothetical protein.
  
   
 0.692
GFO_3292
Conserved hypothetical protein.
 
 
 0.574
GFO_1440
Conserved hypothetical protein.
  
     0.549
ftsI
FtsI-like transpeptidase/penicillin-binding protein.
 
 
 0.542
GFO_3579
Gliding motility protein GldD.
  
     0.538
Your Current Organism:
Gramella forsetii
NCBI taxonomy Id: 411154
Other names: Cytophaga sp. KT0803, G. forsetii KT0803, Gramella forsetii KT0803, Gramella forsetii str. KT0803, Gramella forsetii strain KT0803
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.