STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GFO_0843Two-component system response regulator containing LytTR DNA-binding domain. (238 aa)    
Predicted Functional Partners:
GFO_2163
Two-component system sensor histidine kinase.
 
 
 0.860
GFO_0741
Two-component system sensor histidine kinase.
 
   0.845
GFO_3457
Two-component system sensor histidine kinase.
 
   0.842
GFO_1015
Membrane protein containing an internal histidine kinase domain.
 
   0.841
GFO_2625
Two-component system sensor histidine kinase.
 
   0.793
GFO_3456
Two-component system response regulator containing LytTR DNA-binding domain.
  
     0.775
GFO_0844
Transmembrane family-2 glycosyl transferase-possibly involved in biofilm formation.
       0.529
GFO_0842
Hypothetical protein.
       0.450
GFO_0845
Hypothetical protein.
       0.443
GFO_0846
Protein containing response regulator receiver domain-possibly control of alkaline phosphatase.
       0.443
Your Current Organism:
Gramella forsetii
NCBI taxonomy Id: 411154
Other names: Cytophaga sp. KT0803, G. forsetii KT0803, Gramella forsetii KT0803, Gramella forsetii str. KT0803, Gramella forsetii strain KT0803
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.