STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GFO_0971Sterol desaturase family protein. (297 aa)    
Predicted Functional Partners:
GFO_3620
Conserved hypothetical protein, membrane.
  
 
   0.773
GFO_0972
Metallo-beta-lactamase/rhodanese-like domain protein.
       0.745
GFO_3617
Iron-sulfur binding transmembrane protein.
  
     0.733
GFO_3618
RfbJ-like lipopolysaccharide biosynthesis glycosyl transferase.
 
 
   0.711
GFO_3616
FAD-dependent pyridine nucleotide-disulfide oxidoreductase.
  
     0.708
GFO_3612
Secreted protein containing DUF547.
 
     0.605
GFO_3614
Conserved hypothetical protein, secreted.
  
    0.596
GFO_3609
Conserved hypothetical protein.
 
     0.591
crtB
Phytoene synthase.
  
 
 0.563
GFO_3619
Transmembrane family-2 glycosyl transferase-possibly involved in biofilm formation.
 
     0.554
Your Current Organism:
Gramella forsetii
NCBI taxonomy Id: 411154
Other names: Cytophaga sp. KT0803, G. forsetii KT0803, Gramella forsetii KT0803, Gramella forsetii str. KT0803, Gramella forsetii strain KT0803
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.