STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GFO_0985Two-component system response regulator containing LytTR DNA-binding domain. (228 aa)    
Predicted Functional Partners:
GFO_0741
Two-component system sensor histidine kinase.
 
   0.832
GFO_3457
Two-component system sensor histidine kinase.
 
   0.829
GFO_1015
Membrane protein containing an internal histidine kinase domain.
 
   0.827
GFO_2163
Two-component system sensor histidine kinase.
 
   0.826
GFO_1017
Two-component system response regulator containing LytTR DNA-binding domain.
  
     0.765
GFO_2626
Two-component response regulator containing LytTR DNA-binding domain.
  
     0.753
GFO_3456
Two-component system response regulator containing LytTR DNA-binding domain.
  
     0.751
GFO_2625
Two-component system sensor histidine kinase.
 
   0.645
GFO_0986
Membrane protein, UPF0126.
       0.603
GFO_0981
Dihydroflavonol-4-reductase-like protein.
 
     0.508
Your Current Organism:
Gramella forsetii
NCBI taxonomy Id: 411154
Other names: Cytophaga sp. KT0803, G. forsetii KT0803, Gramella forsetii KT0803, Gramella forsetii str. KT0803, Gramella forsetii strain KT0803
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.