STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GFO_1041Trehalose 6-phosphate synthase/phosphatase. (738 aa)    
Predicted Functional Partners:
kat
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
  
 0.982
treA
Trehalase.
 
 0.980
GFO_1042
Glycosyl hydrolase, family 15.
 
   
 0.932
GFO_3430
Peptidoglycan-binding LysM domain containing protein.
   
  
 0.818
GFO_0148
CapI-like UDP-glucuronic acid epimerase.
   
 
  0.801
GFO_1220
NAD-dependent epimerase/dehydratase family protein.
   
 
  0.801
GFO_1181
Trehalase-like protein.
  
 
 0.755
GFO_0840
Aldo/keto reductase family protein.
   
  
 0.705
GFO_1874
Aldo/keto reductase family protein.
   
  
 0.705
osmC-2
OsmC-like protein.
   
    0.691
Your Current Organism:
Gramella forsetii
NCBI taxonomy Id: 411154
Other names: Cytophaga sp. KT0803, G. forsetii KT0803, Gramella forsetii KT0803, Gramella forsetii str. KT0803, Gramella forsetii strain KT0803
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.