STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GFO_1183Short-chain dehydrogenase/reductase family protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (342 aa)    
Predicted Functional Partners:
GFO_1180
Conserved hypothetical protein, membrane.
 
   0.789
GFO_1181
Trehalase-like protein.
 
     0.723
rbn
Ribonuclease BN.
 
    0.578
GFO_1184
Copper-translocating P-type ATPase.
  
    0.570
GFO_1182
Hypothetical protein.
       0.563
GFO_1179
Conserved hypothetical protein, membrane.
  
   0.551
GFO_1337
Conserved hypothetical protein, membrane.
  
   0.544
GFO_1177
Conserved hypothetical protein, membrane.
 
    0.540
GFO_3392
Conserved hypothetical protein.
  
    0.469
GFO_3019
Short-chain dehydrogenase/reductase family protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.468
Your Current Organism:
Gramella forsetii
NCBI taxonomy Id: 411154
Other names: Cytophaga sp. KT0803, G. forsetii KT0803, Gramella forsetii KT0803, Gramella forsetii str. KT0803, Gramella forsetii strain KT0803
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.