STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ushAPeriplasmic 5'-nucleotidase; Belongs to the 5'-nucleotidase family. (551 aa)    
Predicted Functional Partners:
GFO_1279
Periplasmic 5'-nucleotidase; Belongs to the 5'-nucleotidase family.
 
  
 
0.961
cysD
Sulfate adenylyltransferase subunit 2.
     
 0.901
cysN
Sulfate adenylyltransferase subunit 1; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
     
  0.900
GFO_3158
Membrane protein.
     
  0.900
GFO_1277
Secreted protein containing a thioredoxin domain.
 
     0.834
GFO_1275
Secreted protein.
       0.776
GFO_1274
Membrane protein containing DoxX domain.
       0.773
dsbD
Thiol:disulfide interchange protein DsbD 1.
       0.692
GFO_0644
Secreted or periplasmic 5'-nucleotidase.
 
     0.645
GFO_1273
Hypothetical protein.
       0.565
Your Current Organism:
Gramella forsetii
NCBI taxonomy Id: 411154
Other names: Cytophaga sp. KT0803, G. forsetii KT0803, Gramella forsetii KT0803, Gramella forsetii str. KT0803, Gramella forsetii strain KT0803
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.