STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GFO_1300Conserved hypothetical protein, membrane or secreted. (210 aa)    
Predicted Functional Partners:
GFO_1299
Conserved hypothetical protein, membrane.
 
     0.944
GFO_1296
Conserved hypothetical protein, membrane.
 
     0.910
GFO_1295
HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
     0.885
GFO_1298
Secreted protein.
       0.746
GFO_1294
AcrB/AcrD/AcrF family heavy metal cation efflux protein containing OEP domains; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
     0.714
GFO_1297
Hypothetical protein.
       0.658
GFO_2426
Phage tail tape measure protein.
  
     0.506
GFO_1301
Hypothetical protein.
       0.470
GFO_1261
FecR family protein.
  
     0.417
Your Current Organism:
Gramella forsetii
NCBI taxonomy Id: 411154
Other names: Cytophaga sp. KT0803, G. forsetii KT0803, Gramella forsetii KT0803, Gramella forsetii str. KT0803, Gramella forsetii strain KT0803
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.