STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GFO_1342Copper-translocating P-type ATPase. (834 aa)    
Predicted Functional Partners:
GFO_1184
Copper-translocating P-type ATPase.
 
 
0.933
GFO_2935
Copper-translocating P-type ATPase.
 
 
0.933
GFO_1020
Cu/Zn superoxide dismutase.
   
 0.891
GFO_1095
Secreted protein.
   
 0.891
GFO_1431
Heavy metal-transporting P-type ATPase-most likely copper-transporting.
 
 
0.623
GFO_1200
Heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase.
 
 
0.618
GFO_0024
Heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase.
 
 
0.610
GFO_0269
Heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase.
 
 
0.602
GFO_1341
SCO1/SenC family electron transport protein.
     
 0.598
GFO_1321
Conserved hypothetical protein.
  
  
 0.549
Your Current Organism:
Gramella forsetii
NCBI taxonomy Id: 411154
Other names: Cytophaga sp. KT0803, G. forsetii KT0803, Gramella forsetii KT0803, Gramella forsetii str. KT0803, Gramella forsetii strain KT0803
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.